par Nahata, Kanika K.D.;Bielejec, Filip;Monetta, Juan;Dellicour, Simon 
;Rambaut, Andrew;Suchard, Marc M.A.;Baele, Guy;Lemey, Philippe
Référence Virus evolution, 8, 2, veac088
Publication Publié, 2022
;Rambaut, Andrew;Suchard, Marc M.A.;Baele, Guy;Lemey, PhilippeRéférence Virus evolution, 8, 2, veac088
Publication Publié, 2022
Article révisé par les pairs
| Résumé : | Phylogeographic analyses aim to extract information about pathogen spread from genomic data, and visualising spatio-temporal reconstructions is a key aspect of this process. Here we present SPREAD 4, a feature-rich web-based application that visualises estimates of pathogen dispersal resulting from Bayesian phylogeographic inference using BEAST on a geographic map, offering zoom-and-filter functionality and smooth animation over time. SPREAD 4 takes as input phylogenies with both discrete and continuous location annotation and offers customised visualisation as well as generation of publication-ready figures. SPREAD 4 now features account-based storage and easy sharing of visualisations by means of unique web addresses. SPREAD 4 is intuitive to use and is available online at https://spreadviz.org, with an accompanying web page containing answers to frequently asked questions at https://beast.community/spread4. |
