par Fonseca, Vagner;Libin, Pieter;Theys, Kristof;Faria, Nuno Rodrigues;Nunes, Márcio Roberto Texeira;Restovic, Maria M.I.;Freire, Murilo;Giovanetti, Marta;Cuypers, Lize;Nowe, Ann 
;Abecasis, Ana A.B.;Deforche, Koen;Santiago, Gilberto G.A.;de Siqueira, Isadora I.C.;San, Emmanuel E.J.;Machado, Kaliane K.C.B.;Azevedo, Vasco;Bispo-De Filippis, Ana Maria;da Cunha, Rivaldo Venâncio;Pybus, Oliver George;Vandamme, Anne-Mieke;Alcantara, Luiz Carlos L.C.J.;de Oliveira, Tulio
Référence P L o S Neglected Tropical Diseases, 13, 5, e0007231
Publication Publié, 2019-05
;Abecasis, Ana A.B.;Deforche, Koen;Santiago, Gilberto G.A.;de Siqueira, Isadora I.C.;San, Emmanuel E.J.;Machado, Kaliane K.C.B.;Azevedo, Vasco;Bispo-De Filippis, Ana Maria;da Cunha, Rivaldo Venâncio;Pybus, Oliver George;Vandamme, Anne-Mieke;Alcantara, Luiz Carlos L.C.J.;de Oliveira, TulioRéférence P L o S Neglected Tropical Diseases, 13, 5, e0007231
Publication Publié, 2019-05
Article révisé par les pairs
| Résumé : | In recent years, an increasing number of outbreaks of Dengue, Chikungunya and Zika viruses have been reported in Asia and the Americas. Monitoring virus genotype diversity is crucial to understand the emergence and spread of outbreaks, both aspects that are vital to develop effective prevention and treatment strategies. Hence, we developed an efficient method to classify virus sequences with respect to their species and sub-species (i.e. serotype and/or genotype). This tool provides an easy-to-use software implementation of this new method and was validated on a large dataset assessing the classification performance with respect to whole-genome sequences and partial-genome sequences. Available online: http://krisp.org.za/tools.php. |
