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DI-fusion

  • Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak
    par Dellicour, Simon , Baele, Guy , Dudas, Gytis , Faria, Nuno Rodrigues , Pybus, Oliver George , Suchard, Marc A , Rambaut, Andrew , Lemey, Philippe
    Publication 2018-06-08
  • Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa
    par Faria, Nuno Rodrigues , Vidal, Nicole , Lourenco, José , Raghwani, Jayna , Sigaloff, Kim Catherina Eve , Tatem, Andrew J , van de Vijver, D.A.M. , Pineda-Peña, Andrea Clemencia , Rose, Rebecca , Wallis, Carole Lorraine , Ahuka-Mundeke, Steve , Muyembe-Tamfum, Jean Jacques , Muwonga, Jérémie , Suchard, Marc M.A. , Rinke de Wit, Tobias T.F. , Hamers, Raph R.L. , Ndembi, Nicaise , Baele, Guy , Peeters, Martine , Pybus, Oliver George , Lemey, Philippe , Dellicour, Simon
    Publication 2019-12
  • Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable
    par Mavian, Carla , Pond, Sergei Kosakovsky , Marini, Simone , Magalis, Brittany Rife , Vandamme, Anne-Mieke , Dellicour, Simon , Scarpino, Samuel , Houldcroft, Charlotte , Villabona-Arenas, Julian , Paisie, Taylor , Trovão, Nídia Sequeira , Boucher, Christina , Zhang, Yun , Scheuermann, Richard R.H. , Gascuel, Olivier , Lam, Tommy Tsan-Yuk , Suchard, Marc M.A. , Abecasis, Ana A.B. , Wilkinson, Eduan , de Oliveira, Tulio , Bento, Ana I. , Schmidt, Heiko A. , Martin, Darren D.P. , Hadfield, James , Faria, Nuno Rodrigues , Grubaugh, Nathan , Neher, Richard , Baele, Guy , Lemey, Philippe , Stadler, Tanja , Albert, Jan , Crandall, Keith , Leitner, Thomas , Stamatakis, Alexandros , Prosperi, Mattia , Salemi, Marco
    Publication 2020-06
  • Genomic and Epidemiological Surveillance of Zika Virus in the Amazon Region
    par Giovanetti, Marta , Faria, Nuno Rodrigues , Lourenco, José , Goes de Jesus, Jaqueline , Xavier, Joilson , Claro, Ingra Morales , Kraemer, Moritz U G , Fonseca, Vagner , Dellicour, Simon , Thézé, Julien , da Silva Salles, Flavia , Gräf, Tiago , Silveira, Paola Paz , do Nascimento, Valdinete Alves , Costa de Souza, Victor , de Melo Iani, Felipe Campos , Castilho-Martins, Emerson Augusto , Cruz, Laura Nogueira , Wallau, Gabriel , Fabri, Allison , Levy, Flávia , Quick, Joshua , de Azevedo, Vasco , Aguiar, Renato Santana , de Oliveira, Tulio , Bôtto de Menezes, Camila , da Costa Castilho, Marcia , Terra, Tirza Matos , Souza da Silva, Marineide , Bispo de Filippis, Ana Maria , Luiz de Abreu, André , Oliveira, Wanderson Kleber , Croda, Julio , Campelo de Albuquerque, Carlos C.F. , Nunes, Márcio Roberto Teixeira , Sabino, Ester Cerdeira , Loman, Nicholas J , Naveca, Felipe Gomes , Pybus, Oliver George , Alcantara, Luiz Carlos L.C.J.
    Publication 2020-02
  • Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework
    par Dellicour, Simon , Lequime, Sebastian , Vrancken, Bram , Gill, Mandev M.S. , Bastide, Paul , Gangavarapu, Karthik , Matteson, Nathaniel N.L. , Tan, Yi , du Plessis, Louis , Fisher, Alexander A.A. , Nelson, Martha M.I. , Gilbert, Marius , Suchard, Marc M.A. , Andersen, Kristian G , Grubaugh, Nathan , Pybus, Oliver George , Lemey, Philippe
    Publication 2020-12