Articles dans des revues avec comité de lecture (156)
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Pham, N. C., Haibe-Kains, B., Bellot, P., Bontempi, G., & Meyer, P. E. (2017). Study of Meta-analysis Strategies for Network Inference Using Information-Theoretic Approaches. Proceedings - International Workshop on Database and Expert Systems Applications,, 7816628 76-83. doi:10.1109/DEXA.2016.03046.
Cava, C., Colaprico, A., Bertoli, G., Graudenzi, A., Silva, T. C., Olsen, C., Noushmehr, H., Bontempi, G., Mauri, G., & Castiglioni, I. (2017). SpidermiR: an R/Bioconductor package for integrative analysis with miRNA data. International journal of molecular sciences. doi:10.3390/ijms1802027447.
Cava, C., Colaprico, A., Bertoli, G., Bontempi, G., Mauri, G., & Castiglioni, I. (2016). How interacting pathways are regulated by miRNAs in breast cancer subtypes. BMC bioinformatics, 17, 348. doi:10.1186/s12859-016-1196-148.
Van Grembergen, O., Bizet, M., de Bony, E. J., Calonne, E., Putmans, P., Brohée, S., Olsen, C., Guo, M., Bontempi, G., Sotiriou, C., Defrance, M., & Fuks, F. (2016). Portraying breast cancers with long noncoding RNAs. Science advances, 2(9), e1600220. doi:10.1126/sciadv.160022050.
Silva, T. T., Colaprico, A., Olsen, C., D'Angelo, F., Bontempi, G., Ceccarelli, M., & Noushmehr, H. (2016). TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages [version 1; referees: 1 approved, 1 approved with reservations]. F1000Research, 5, 1542. doi:10.12688/F1000RESEARCH.8923.152.
Colaprico, A., Da Silva, T., Olsen, C., Garofano, L., Cava, C., Garolini, D., Sabedot, T. T., Malta, T. T., Pagnotta, S. S., Castiglioni, I., Ceccarelli, M., Bontempi, G., & Noushmehr, H. (2015). TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data. Nucleic acids research. doi:10.1093/nar/gkv150754.
Lerman, L., Poussier, R., Bontempi, G., Markowitch, O., & Standaert, F.-X. (2015). Template attacks vs Machine Learning Revisited. Lecture notes in computer science, 9064, 20-33.55.
Olsen, C., Fleming, K., Prendergast, N., Rubio, R., Emmert-Streib, F., Bontempi, G., Quackenbush, J., & Haibe-Kains, B. (2015). Using shRNA experiments to validate gene regulatory networks. Genomics Data, 4, 123-126. doi:10.1016/j.gdata.2015.03.011