Articles dans des revues avec comité de lecture (49)
  1. 1. Piron, A., Szymczak, F., Folon, L., Crouch, D. J. M., Papadopoulou, T., Lytrivi, M., Tong, Y., Alvelos, M. I., Colli, M. L., Yi, X., Pekalski, M. M., Hatzikotoulas, K., Huerta-Chagoya, A., Taylor, H. J., Type 2 Diabetes Global Genomics Initiative,, Defrance, M., Todd, J. A., Eizirik, D. L., Mercader, J. M., & Cnop, M. (2025). Identification of novel type 1 and type 2 diabetes genes by co-localization of human islet eQTL and GWAS variants with colocRedRibbon. Cell Genomics, 101004. doi:10.1016/j.xgen.2025.101004
  2. 2. Rivière, Q., Raskin, V., de Melo, R., Boutet, S., Corso, M., Defrance, M., Webb, A. A., Verbruggen, N., & Anoman, D. A. (2024). Effects of light regimes on circadian gene co‐expression networks in Arabidopsis thaliana. Plant Direct, 8(8). doi:10.1002/pld3.70001
  3. 3. Cheron, J., Beccari, L., Hague, P., Icick, R., Despontin, C., Carusone, T., Defrance, M., Bhogaraju, S., Martin-Garcia, E., Capellan, R., Maldonado, R., Vorspan, F., Bonnefont, J., & de Kerchove d'Exaerde, A. (2023). USP7/Maged1-mediated H2A monoubiquitination in the paraventricular thalamus: an epigenetic mechanism involved in cocaine use disorder. Nature communications, 14(1). doi:10.1038/s41467-023-44120-2
  4. 4. Piron, A., Szymczak, F., Papadopoulou, T., Alvelos, M. I., Defrance, M., Lenaerts, T., Eizirik, D. L., & Cnop, M. (2023). RedRibbon: A new rank–rank hypergeometric overlap for gene and transcript expression signatures. Life science alliance, 7(2), e202302203. doi:10.26508/lsa.202302203
  5. 5. Giuili, E., Grolaux, R., Macedo, C. Z. N. M. C., Desmyter, L., Pichon, B., Neuens, S., Vilain, C., Olsen, C., Van Dooren, S., Smits, G., & Defrance, M. (2023). Comprehensive evaluation of the implementation of episignatures for diagnosis of neurodevelopmental disorders (NDDs). Human genetics. doi:10.1007/s00439-023-02609-2
  6. 6. Araujo, N. D. S., Perez, R., Willot, Q., Defrance, M., & Aron, S. (2023). Facing lethal temperatures: Heat-shock response in desert and temperate ants. Ecology and evolution, 13(9), e10438. doi:10.1002/ece3.10438
  7. 7. Hardy, A., Duharcourt, S., & Defrance, M. (2023). DNA Modification Patterns Filtering and Analysis Using DNAModAnnot. Methods in molecular biology, 2624, 87-114. doi:10.1007/978-1-0716-2962-8_7
  8. 8. Bizet, M., Defrance, M., Calonne, E., Bontempi, G., Sotiriou, C., Fuks, F., & Jeschke, J. (2022). Improving Infinium MethylationEPIC data processing: re-annotation of enhancers and long noncoding RNA genes and benchmarking of normalization methods. Epigenetics, 17(13), 2434-2454. doi:10.1080/15592294.2022.2135201
  9. 9. Grolaux, R., Hardy, A., Olsen, C., Van Dooren, S., Smits, G., & Defrance, M. (2022). Identification of differentially methylated regions in rare diseases from a single-patient perspective. Clinical Epigenetics, 14(1). doi:10.1186/s13148-022-01403-7
  10. 10. Rivière, Q., Corso, M., Ciortan, M., Noël, G., Verbruggen, N., & Defrance, M. (2022). Exploiting Genomic Features to Improve the Prediction of Transcription Factor-Binding Sites in Plants. Plant and Cell Physiology, 63(10), 1457-1473. doi:10.1093/pcp/pcac095
  11. 11. Ciortan, M., & Defrance, M. (2022). GNN-based embedding for clustering scRNA-seq data. Bioinformatics, 38(4), 1037-1044. doi:10.1093/bioinformatics/btab787
  12. 12. Alonso, L., Piron, A., Morán, I., Guindo-Martínez, M., Bonàs-Guarch, S., Atla, G., Miguel-Escalada, I., Royo, R., Puiggròs, M., Garcia-Hurtado, X., Suleiman, M., Marselli, L., Esguerra, J. L. S., Turatsinze, J. V., Torres, J. M., Nylander, V., Chen, J., Eliasson, L., Defrance, M., Amela, R., MAGIC,, Mulder, H., Gloyn, A. L., Groop, L., Marchetti, P., Eizirik, D. L., Ferrer, J., Mercader, J. J., Cnop, M., & Torrents, D. (2021). TIGER: The gene expression regulatory variation landscape of human pancreatic islets. Cell reports, 37(2), 109807. doi:10.1016/j.celrep.2021.109807
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