Articles dans des revues avec comité de lecture (39)
  1. 13. Tarabichi, M., Demeulemeester, J., Verfaillie, A., Flanagan, A. M., Van Loo, P., & Konopka, T. (2021). A pan-cancer landscape of somatic mutations in non-unique regions of the human genome. Nature biotechnology. doi:10.1038/s41587-021-00971-y
  2. 14. Campbell, P. J., Sotiriou, C., Tarabichi, M., ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium,, et al. (2020). Pan-cancer analysis of whole genomes. Nature (London), 578(7793), 82-93. doi:10.1038/s41586-020-1969-6
  3. 15. Gerstung, M., Jolly, C., Leshchiner, I., Dentro, S., Gonzalez, S., Rosebrock, D., Mitchell, T. J., Rubanova, Y., Anur, P., Yu, K., Tarabichi, M., Deshwar, A., Wintersinger, J. J., Kleinheinz, K., Vázquez-García, I., Haase, K., Jerman, L., Sengupta, S., Macintyre, G., Malikic, S., Donmez, N., Livitz, D., Cmero, M., Demeulemeester, J., Schumacher, S., Fan, Y., Yao, X., Lee, J., Schlesner, M., Boutros, P., Bowtell, D., Zhu, H., Getz, G., Imielinski, M., Beroukhim, R., Sahinalp, C., Ji, Y., Peifer, M., Markowetz, F., Mustonen, V., Yuan, K., Wang, W., Morris, Q. D., Spellman, P., Wedge, D. C., & Van Loo, P. (2020). The evolutionary history of 2,658 cancers. Nature (London), 578(7793), 122-128. doi:10.1038/s41586-019-1907-7
  4. 16. Salcedo, A., Tarabichi, M., Espiritu, S. M. S., Deshwar, A. G., David, M., Wilson, N. M., Dentro, S., Wintersinger, J. J., Liu, L., Ko, M., Sivanandan, S., Zhang, H., Zhu, K., Ou Yang, T.-H., Chilton, J. J., Buchanan, A., Lalansingh, C. C., P'ng, C., Anghel, C. C., Umar, I., Lo, B., Zou, W., DREAM SMC-Het Participants,, Simpson, J. T., Stuart, J. M., Anastassiou, D., Guan, Y., Ewing, A. D., Ellrott, K., Wedge, D. C., Morris, Q., Van Loo, P., & Boutros, P. C. (2020). A community effort to create standards for evaluating tumor subclonal reconstruction. Nature biotechnology, 38(1), 97-107. doi:10.1038/s41587-019-0364-z
  5. 17. Cmero, M., Yuan, K., Ong, C. S., Schröder, J., PCAWG Evolution and Heterogeneity Working Group,, Corcoran, N., Papenfuss, T., Hovens, C. C., Markowetz, F., Macintyre, G., Tarabichi, M., & PCAWG, C. (2020). Inferring structural variant cancer cell fraction. Nature communications, 11(1), 730. doi:10.1038/s41467-020-14351-8
  6. 18. Li, C. H., Prokopec, S. S., Sun, R. X., Yousif, F., Schmitz, N., PCAWG Tumour Subtypes and Clinical Translation,, Boutros, P. C., Tarabichi, M., & PCAWG, C. (2020). Sex differences in oncogenic mutational processes. Nature communications, 11(1), 4330. doi:10.1038/s41467-020-17359-2
  7. 19. Fittall, M. M., Lyskjaer, I., Ellery, P., Lombard, P., Ijaz, J., Strobl, A.-C., Oukrif, D., Tarabichi, M., Sill, M., Koelsche, C., Mechtersheimer, G., Demeulemeester, J., Tirabosco, R., Amary, F., Campbell, P. J., Pfister, S. M., Jones, D. T., Pillay, N., Van Loo, P., Behjati, S., & Flanagan, A. M. (2020). Drivers underpinning the malignant transformation of giant cell tumour of bone. Journal of pathology, 252(4), 433-440. doi:10.1002/path.5537
  8. 20. Rubanova, Y., Shi, R., Harrigan, C. C., Li, R., Wintersinger, J. J., Sahin, N., Deshwar, A., Tarabichi, M., Morris, Q., PCAWG, C., & PCAWG Evolution and Heterogeneity Working Group, (2020). Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig. Nature communications, 11(1), 731. doi:10.1038/s41467-020-14352-7
  9. 21. Steele, C. D., Tarabichi, M., Oukrif, D., Webster, A. P., Ye, H., Fittall, M. M., Lombard, P., Martincorena, I., Tarpey, P. S., Collord, G., Haase, K., Strauss, S. J., Berisha, F., Vaikkinen, H., Dhami, P., Jansen, M., Behjati, S., Amary, F. M., Tirabosco, R., Feber, A., Campbell, P. J., Alexandrov, L. B., Van Loo, P., Flanagan, A. M., & Pillay, N. (2019). Undifferentiated Sarcomas Develop through Distinct Evolutionary Pathways. Cancer cell, 35(3), 441-456.e8. doi:10.1016/j.ccell.2019.02.002
  10. 22. Perez-Rodriguez, D., Kalyva, M., Leija-Salazar, M., Lashley, T., Tarabichi, M., Chelban, V., Gentleman, S., Schottlaender, L., Franklin, H., Vasmatzis, G., Houlden, H., Schapira, A. H., Warner, T. T., Holton, J. L., Jaunmuktane, Z., & Proukakis, C. (2019). Investigation of somatic CNVs in brains of synucleinopathy cases using targeted SNCA analysis and single cell sequencing. Acta neuropathologica communications, 7(1), 219. doi:10.1186/s40478-019-0873-5
  11. 23. Fittall, M. W., Mifsud, W., Pillay, N., Ye, H., Strobl, A.-C., Verfaillie, A., Demeulemeester, J., Zhang, L., Berisha, F., Tarabichi, M., Young, M. D., Miranda, E., Tarpey, P. S., Tirabosco, R., Amary, F., Grigoriadis, A. A., Stratton, M. R., Van Loo, P., Antonescu, C. C., Campbell, P. J., Flanagan, A. M., & Behjati, S. (2018). Recurrent rearrangements of FOS and FOSB define osteoblastoma. Nature communications, 9(1), 2150. doi:10.1038/s41467-018-04530-z
  12. 24. Tarabichi, M., Martincorena, I., Gerstung, M., Leroi, A. M., Markowetz, F., PCAWG Evolution and Heterogeneity Working Group,, Spellman, P. T., Morris, Q. D., Lingjærde, O. C., Wedge, D. C., & Van Loo, P. (2018). Neutral tumor evolution? Nature genetics, 50(12), 1630-1633. doi:10.1038/s41588-018-0258-x
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