Parties d'ouvrages collectifs (1)
  1. 1. Pucci, F., & Rooman, M. (2016). A little walk from physical to biological complexity: protein folding and stability. In About various kinds of interactions: published in honor of Philippe Spindel’s 65th birthday. UMons University Press: edited by N. Boulanger and S. Detournay.
    2.   Articles dans des revues avec comité de lecture (57)
  2. 1. Zhang, J., Kinch, L., Katsonis, P., Lichtarge, O., Jagota, M., Song, Y. S., Sun, Y., Shen, Y., Kuru, N., Dereli, O., Adebali, O., Alladin, M. A., Pal, D., Capriotti, E., Turina, M. P., Savojardo, C., Martelli, P. L., Babbi, G., Casadio, R. R., Pucci, F., Rooman, M., Cia Beriain, G., Tsishyn, M., Strokach, A., Hu, Z., van Loggerenberg, W., Roth, F. P., Radivojac, P., Brenner, S. E., Cong, Q., & Grishin, N. (2024). Assessing predictions on fitness effects of missense variants in HMBS in CAGI6. Human genetics. doi:10.1007/s00439-024-02680-3
  3. 2. Li, D., Pucci, F., & Rooman, M. (2024). Prediction of Paratope–Epitope Pairs Using Convolutional Neural Networks. International Journal of Molecular Sciences (CD-ROM), 25(10), 5434. doi:10.3390/ijms25105434
  4. 3. Tsishyn, M., Cia Beriain, G., Hermans, P., Kwasigroch, J.-M., Rooman, M., & Pucci, F. (2024). FiTMuSiC: leveraging structural and (co)evolutionary data for protein fitness prediction. Human genomics, 18(1). doi:10.1186/s40246-024-00605-9
  5. 4. Yang, Y., Wei, Z., Cia Beriain, G., Song, X., Pucci, F., Rooman, M., Xue, F., & Hou, Q. (2024). MHCII-peptide presentation: an assessment of the state-of-the-art prediction methods. Frontiers in immunology, 15. doi:10.3389/fimmu.2024.1293706
  6. 5. Pucci, F., Zerihun, M. B., Rooman, M., & Schug, A. (2024). pycofitness—Evaluating the fitness landscape of RNA and protein sequences. Bioinformatics, 40(2). doi:10.1093/bioinformatics/btae074
  7. 6. Tsishyn, M., Pucci, F., & Rooman, M. (2024). Quantification of biases in predictions of protein–protein binding affinity changes upon mutations. Briefings in bioinformatics, 25(1). doi:10.1093/bib/bbad491
  8. 7. Shen, L., Liu, Y., Chen, L., Lei, T., Ren, P., Ji, M., Song, W., Lin, H., Su, W., Wang, S., Rooman, M., & Pucci, F. (2024). Genomic basis of environmental adaptation in the widespread poly-extremophilic Exiguobacterium group. The I S M E Journal, 18(1). doi:10.1093/ismejo/wrad020
  9. 8. Hou, Q., Rooman, M., & Pucci, F. (2023). Enzyme Stability-Activity Trade-Off: New Insights from Protein Stability Weaknesses and Evolutionary Conservation. Journal of chemical theory and computation, 19(12), 3664-3671. doi:10.1021/acs.jctc.3c00036
  10. 9. Rooman, M., & Pucci, F. (2023). Estimating the Vertical Ionization Potential of Single-Stranded DNA Molecules. Journal of chemical information and modeling, 63(6), 1766-1775. doi:10.1021/acs.jcim.2c01525
  11. 10. Cia Beriain, G., Pucci, F., & Rooman, M. (2023). Critical review of conformational B-cell epitope prediction methods. Briefings in bioinformatics, 24(1). doi:10.1093/bib/bbac567
  12. 11. Cia Beriain, G., Kwasigroch, J.-M., Stamatopoulos, B., Rooman, M., & Pucci, F. (2023). pyScoMotif: discovery of similar 3D structural motifs across proteins. Bioinformatics Advances, 3(1). doi:10.1093/bioadv/vbad158
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