Articles dans des revues avec comité de lecture (100)
  1. 1. Quarto, G., Li Greci, A., Bizet, M., Penning, A., Primac, I., Murisier, F., Garcia-Martinez, L., Borges, R. L., Gao, Q., Cingaram, P., Calonne, E., Hassabi, B., Hubert, C., Herpoel, A., Putmans, P., Mies, F., Martin, J., Van Der Linden, L., Dube, G., Kumar, P., Soin, R., Kumar, A., Misra, A., Lan, J., Paque, M., Gupta, Y. K., Blomme, A., Close, P., Esteve, P. O., Caine, E., Riching, K. M., Gueydan, C., Daniels, D. L., Pradhan, S., Shiekhattar, R., David, Y., Morey, L., Jeschke, J., Deplus, R., Collignon, E., & Fuks, F. (2025). Fine-tuning of gene expression through the Mettl3-Mettl14-Dnmt1 axis controls ESC differentiation. Cell, 188(4), 998-1018. doi:10.1016/j.cell.2024.12.009
  2. 2. Pinello, N., Song, R., Lee, Q., Calonne, E., Duan, K. L., Wong, E., Tieng, J., Mehravar, M., Rong, B., Lan, F., Roediger, B., Ma, C., Yuan, B., Rasko, J. J., Larance, M., Ye, D., Fuks, F., & Wong, J. J. L. (2024). Dynamic changes in RNA m6A and 5 hmC influence gene expression programs during macrophage differentiation and polarisation. Cellular and molecular life sciences, 81(1), 229. doi:10.1007/s00018-024-05261-9
  3. 3. Pinello, N., Song, R., Lee, Q., Calonne, E., Larance, M., Fuks, F., & Wong, J. J. L. (2024). A multiomics dataset for the study of RNA modifications in human macrophage differentiation and polarisation. Scientific Data, 11(1), 252. doi:10.1038/s41597-024-03076-8
  4. 4. Singh, B. N., Tran, H., Kramer, J., Kirichenko, E., Changela, N., Wang, F., Feng, Y., Kumar, D., Tu, M., Lan, J., Bizet, M., Fuks, F., & Steward, R. (2024). Tet-dependent 5-hydroxymethyl-Cytosine modification of mRNA regulates axon guidance genes in Drosophila. PloS one, 19(2), e0293894. doi:10.1371/journal.pone.0293894
  5. 5. Fernandes Bonfim, M., Aitchedji, C., Van Goethem, F., Sauvage, L., Poinsot, T., Calonne, E., Deplus, R., Fuks, F., Eizirik, D. L., & Op De Beeck, A. (2024). The N6-methyladenosine RNA epigenetic modification modulates the amplification of coxsackievirus B1 in human pancreatic beta cells. Frontiers in microbiology, 15, 1501061. doi:10.3389/fmicb.2024.1501061
  6. 6. Ma, H., Bizet, M., Soares Da Costa, C., Murisier, F., de Bony, E. J., Wang, M.-K., Yoshimi, A., Lin, K.-T., Riching, K. M., Wang, X., Beckman, J. I., Arya, S., Droin, N., Calonne, E., Hassabi, B., Zhang, Q.-Y., Li, A., Putmans, P., Malbec, L., Hubert, C., Lan, J., Mies, F., Bula Ibula Yanga, Y., Solary, E., Daniels, D., Gupta, Y. K., Deplus, R., Abdel-Wahab, O., Yang, Y.-G., & Fuks, F. (2023). SRSF2 plays an unexpected role as reader of m5C on mRNA, linking epitranscriptomics to cancer. Molecular cell, 83(23), 4239-4254.e10. doi:10.1016/j.molcel.2023.11.003
  7. 7. Chung, F. F.-L., Maldonado, S. G., Nemc, A., Bouaoun, L., Cahais, V., Cuenin, C., Salle, A., Johnson, T., Ergüner, B., Laplana, M., Datlinger, P., Jeschke, J., Weiderpass, E., Kristensen, V., Delaloge, S., Fuks, F., Risch, A., Ghantous, A., Plass, C., Bock, C., Kaaks, R., & Herceg, Z. (2023). Buffy coat signatures of breast cancer risk in a prospective cohort study. Clinical Epigenetics, 15(1), 102. doi:10.1186/s13148-023-01509-6
  8. 8. Dube, G., Tiamiou, A., Bizet, M., Boumahd, Y., Gasmi, I., Crake, R., Bellier, J., Nokin, M. J., Calonne, E., Deplus, R., Wissocq, T., Peulen, O., Castronovo, V., Fuks, F., & Bellahcène, A. (2023). Methylglyoxal: a novel upstream regulator of DNA methylation. Journal of experimental & clinical cancer research : CR, 42(1), 78. doi:10.1186/s13046-023-02637-w
  9. 9. Bizet, M., Defrance, M., Calonne, E., Bontempi, G., Sotiriou, C., Fuks, F., & Jeschke, J. (2022). Improving Infinium MethylationEPIC data processing: re-annotation of enhancers and long noncoding RNA genes and benchmarking of normalization methods. Epigenetics, 17(13), 2434-2454. doi:10.1080/15592294.2022.2135201
  10. 10. Primac, I., Penning, A., & Fuks, F. (2022). Cancer epitranscriptomics in a nutshell. Current opinion in genetics & development, 75, 101924. doi:10.1016/j.gde.2022.101924
  11. 11. Lin, X., Swedlund, B., Ton, M.-L. N., Ghazanfar, S., Guibentif, C., Paulissen, C., Baudelet, E., Plaindoux, E., Achouri, Y., Calonne, E., Dubois, C., Mansfield, W., Zaffran, S., Marioni, J. C., Fuks, F., Göttgens, B., Lescroart, F., & Blanpain, C. (2022). Mesp1 controls the chromatin and enhancer landscapes essential for spatiotemporal patterning of early cardiovascular progenitors. Nature cell biology, 24(7), 1114-1128. doi:10.1038/s41556-022-00947-3
  12. 12. Penning, A., Jeschke, J., & Fuks, F. (2022). Why novel mRNA modifications are so challenging and what we can do about it. Nature reviews. Molecular cell biology, 23(6), 385-386. doi:10.1038/s41580-022-00485-8
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